PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_027105
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bHLH
Protein Properties Length: 171aa    MW: 19123.1 Da    PI: 9.7951
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_027105genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH291.9e-091559755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                  +Er RR++  ++ + L++++P++     +K +K  i+  ++eYI++L+
  DCAR_027105 15 SNERLRRKNFADSCSVLQSIVPNL----LPKATKERIVSGTIEYIRELE 59
                 68*********************5....49****************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.401858IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.10E-51363No hitNo description
SMARTSM003538.4E-41464IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-91480IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.5E-71459IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.6E-91679IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MKVDEETRGE AYKRSNERLR RKNFADSCSV LQSIVPNLLP KATKERIVSG TIEYIRELEH  60
DISVLEKLKR SISEKLEANS VLFSFGDRGS AVEVRASGGV AFFGIEAEFR RRLVVDIVKV  120
FDKYGVEILA ANVAVDEHRR KLVVTVTANV GGGERGKVVI EMIRRDILFV *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA132481415
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09820.16e-06bHLH family protein